BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E05LP1|AL425261
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1082 1414 0.0
3x_Contig1609 818 0.0
3x_Contig83 417 e-116
>3x_Contig1082
Length = 4646
Score = 1414 bits (712), Expect = 0.0
Identities = 756/766 (98%), Gaps = 5/766 (0%)
Strand = Plus / Plus
Query: 168 gctgcattttccaagaagttgtggcagatttatcttacacaaggtctgttaatctctttc 227
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gctgcatttttccagaagttgtggcagatttatcttacacaaggtctgttaatctctttc 65
Query: 228 ggacttgcattaatctgtactccaagtatgggattaataccacaatggttcagaaagcgt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ggacttgcattaatctgtactccaagtatgggattaataccacaatggttcagaaagcgt 125
Query: 288 cgtactttagcagctggtattggcgccggagg-agtggtttaggtggtattatcttcaat 346
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 126 cgtactttagcagctggtattggcgccggaggcagtggtttaggtggtattatcttcaat 185
Query: 347 ttggtggatgcaaaagattattgaggtgaaaagtgtaaaatgggcgtkatatagttcaat 406
|||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 186 ttgg-ggatgcaaaagattattgaggtgaaaagtgtaaaatgggcgtta-atagttcaat 243
Query: 407 gtatcatttgtacttctcttagtacactggccttgattctaacaagaacaagaaaccaac 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtatcatttgtacttctcttagtacactggccttgattctaacaagaacaagaaaccaac 303
Query: 467 acatccgtggatccgctcaacagacacaacctcttcgctcaacagacacaacctcttagg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatccgtggatccgctcaacagacacaacctcttcgctcaacagacacaacctcttagg 363
Query: 527 gtagcattcaaagaacacattaatgttttcaagattgtgggaatgtgggcgttgtgcagc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtagcattcaaagaacacattaatgttttcaagattgtgggaatgtgggcgttgtgcagc 423
Query: 587 tgggtgtcgtttacaatgttgtggttatgtgattctcttgtattctctatcagcattcac 646
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgggtgtcgtttacaatgttg-ggttatgtgattctcttgtattctctatcagcattcac 482
Query: 647 ccaaagtattggttataattctaaggaaggttcttacgtatcgtgcatgattagtgtggg 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccaaagtattggttataattctaaggaaggttcttacgtatcgtgcatgattagtgtggg 542
Query: 707 tagtctaatcgggaggccactcgttgggcacattgcagatagatacggcccaattacagt 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tagtctaatcgggaggccactcgttgggcacattgcagatagatacggcccaattacagt 602
Query: 767 aggagcgctcgtaaacttaktggtggcaatcttatgttaggccatgtggattccatgtag 826
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aggagcgctcgtaaacttagtggtggcaatcttatgttaggccatgtggattccatgtag 662
Query: 827 gtcattatctgttgcaatagttttcgctttattgcaaggtggtttaatggggacagtttg 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gtcattatctgttgcaatagttttcgctttattgcaaggtggtttaatggggacagtttg 722
Query: 887 ggttatttttggctctgcgaca-saagagttgtaggattgaaaaaa 931
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 723 ggttatttttggctctgcgacagcaagagttgtaggattgaaaaaa 768
>3x_Contig1609
Length = 15966
Score = 818 bits (412), Expect = 0.0
Identities = 485/502 (96%), Gaps = 6/502 (1%)
Strand = Plus / Minus
Query: 1 atgtctttcctggcggaggcaagctagattatgctgctattggtggtttagcatttggat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6494 atgtctttcctggcggaggcaagctagattatgctgctattggtggtttagcatttgga- 6436
Query: 61 gtatggattattatttgcgccggtgattatatatttctctagaaattatggagttcatgt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6435 gta-ggattattatttgcgccggtgattatatatttctctagaaattatggagttcatgt 6377
Query: 121 tgtcattggactgggtataatttgccaatgcgccgctttattattatgctgcattttcca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6376 tgtcattggactgggtataatttgccaatgcgccgctttattatta-gctgcattttcca 6318
Query: 181 agaagttgtggcagatttatcttacacaaggtctgttaatctctttcggacttgcattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317 agaagttgtggcagatttatcttacacaaggtctgttaatctctttcggacttgcattaa 6258
Query: 241 tctgtactccaagtatgggattaataccacaatggttcagaaagcgtcgtactttagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6257 tctgtactccaagtatgggattaataccacaatggttcagaaagcgtcgtactttagcag 6198
Query: 301 ctggtattggcgccggagg-agtggtttaggtggtattatcttcaatttggtggatgcaa 359
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6197 ctggtattggcgccggaggcagtggtttaggtggtattatcttcaatttgg-ggatgcaa 6139
Query: 360 aagattattgaggtgaaaagtgtaaaatgggcgtkatatagttcaatgtatcatttgtac 419
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 6138 aagattattgaggtgaaaagtgtgaaatgggcgtt-gatagttcaatgtatcatttgtac 6080
Query: 420 ttctcttagtacactggccttgattctaacaagaacaagaaaccaacacatccgtggatc 479
|||||| |||||| |||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 6079 ttctctcagtacattggcattgattctaacaagaacgagaaaccaacacatccatggatc 6020
Query: 480 cgctcaacagacacaacctctt 501
|| |||||||||||||||||
Sbjct: 6019 tgccgaacagacacaacctctt 5998
Score = 624 bits (314), Expect = e-178
Identities = 399/426 (93%), Gaps = 2/426 (0%)
Strand = Plus / Minus
Query: 507 aacagacacaacctcttagggtagcattcaaagaacacattaatgttttcaagattgtgg 566
||||||||||||||||| ||| ||||||||||||||| || | |||||||||| ||||||
Sbjct: 6014 aacagacacaacctcttggggcagcattcaaagaacatatcagtgttttcaaggttgtgg 5955
Query: 567 gaatgtgggcgttgtgcagctgggtgtcgtttacaatgttgtggttatgtgattctcttg 626
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 5954 gaatgtgggcgttgtgcagctgggtgtcgtttacaatgtta-ggttacgtgattctcttg 5896
Query: 627 tattctctatcagcattcacccaaagtattggttataattctaaggaaggttcttacgta 686
||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 5895 tattcactatcagcattcacccaaagtcttggttatgattctgaggaaggttcttacgta 5836
Query: 687 tcgtgcatgattagtgtgggtagtctaatcgggaggccactcgttgggcacattgcagat 746
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 5835 tcgtgcatgattagtgtgggtagtctaattgggaggccactcattgggcacattgcagat 5776
Query: 747 agatacggcccaattacagtaggagcgctcgtaaacttaktggtggcaatcttatgttag 806
||||| ||||||||||||||||| ||||||||||| ||| |||||||||| ||||||| |
Sbjct: 5775 agatatggcccaattacagtaggtgcgctcgtaaatttagtggtggcaattttatgttgg 5716
Query: 807 gccatgtggattccatgtaggtcattatctgttgcaatagttttcgctttattgcaaggt 866
||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 5715 gccatgtggattccatgtaggtctttatctgttgcaatagtgtttgctttattgcaaggt 5656
Query: 867 ggtttaatggggacagtttgggttatttttggctctgcgaca-saagagttgtaggattg 925
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5655 ggtttaatggggacagtttgggttatttttggctctgcgacagcaagggttgtaggattg 5596
Query: 926 aaaaaa 931
||||||
Sbjct: 5595 aaaaaa 5590
>3x_Contig83
Length = 1004
Score = 417 bits (210), Expect = e-116
Identities = 266/276 (96%), Gaps = 7/276 (2%)
Strand = Plus / Minus
Query: 327 taggtggtattatcttcaatttggtggatgcaaaagattattgaggtgaaaagtgtaaaa 386
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 276 taggtggtattatcttcaatttgg-ggatgcaaaagattattgaggtgaaaagtgtaaaa 218
Query: 387 tgggcgtkatatagttcaatgtatcatttgtacttctcttagtacactggccttgattct 446
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgggcgtta-atagttcaatgtatcatttgtacttctcttagtacactggccttgattct 159
Query: 447 aacaagaacaagaaaccaacacatccgtggatccgctcaacagacacaacctcttcgctc 506
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 158 aacaagaacaagaaaccaacacatccgtggatccgctcaacagacacaacctc-tcgctc 100
Query: 507 aacagacacaac-ctcttagggtagcatt-caaagaacacattaatgttttcaagattgt 564
|||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 99 aacagacacaacgctcttagggtagcattaaaaagaaaacattaatgttttcaagattgt 40
Query: 565 gggaat-gt-gggcgttgtgcagctgggtgtcgttt 598
|||||| || ||||||||||||||||||||||||||
Sbjct: 39 gggaatcgtcgggcgttgtgcagctgggtgtcgttt 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6039
Number of Sequences: 1807
Number of extensions: 6039
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 3
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)